Professional Engagements

My Talks

1-  Towards Ontological Mapping of Immunological Data Standards  (Presented at Stanford CEDAR day,  2016)
2- How to design ontology? Tutorial session for the working immunologists ( 12 Annual Symposium in Computational Immunology, 2016)
3- Leveraging the CEDAR Workbench for ontology-linked submission of AIRR data to the NCBI-SRA (NIH All hands meeting Bethesda, 2016)
4-  Use of CEDAR Technology for Ontology-based Submission of Biomedical Data to the NCBI (Presented at Stanford CEDAR Meeting, 2016)
4-  AIRRPort: The Adaptive Immune Receptor Repertoire Study Database and Discovery Portal (Presented at Annual AIRR Meeting, 2017)
5- MiAIRR: Minimum information about an Adaptive Immune Receptor Repertoire Sequencing Experiment (Presented at Annual AIRR Meeting, 2017)
6- CEDAR OnDemand: A Browser extension to generate ontology-based scientific metadata (Presented at CEDAR Meeting, 2017)
7- HIPC Data Template Standardization: The story so far     (Presented in the ImmPort Meeting, 2017)
8- The CAIRR Pipeline: Ontology-Controlled adaptive immune receptor repertoire metadata editing, validation and submission  (Presented at Stanford, 2017 and AIRR Annual meeting, 2017)
9-   CEDAR Workbench for ontology-linked submission of AIRR data to the NCBI-SRA (Yale Biomedical Data science, 2018)
 
Slides share hosts most of my presentations.
 

Editorships

I am in the editorial board of following Journals

  • IEEE Transactions of Big Data
  • Elsevier Journal Data in Brief
  • IEEE Access
  • IEEE Internet Initiatives
  • IEEE Future Directions

Reviewers

I am an active reviewer of the following journals and conferences

  • Biomedical Semantics
  • Bioinformatics
  • BMC BioInformatics
  • Artificial Intelligence
  • Applied Intelligence
  • Information Sciences
  • Journal of Super Computing
  • ISWC
  • ESWC
  • WWW

Conference PC member and organiser

 

I have served as a PC member in a few dozen conferences..

Professional Affiliations

Executive member and Newsletter chair of

AIRR Community  2016 ~ Present

IEEE member 2016 ~ Present

The Yale Science & Engineering Association (YSEA) member    2017 ~ Present

IEEE Computer Society Technical Committee on Intelligent Informatics    2015 – Present

Member IEEE Technical Committee on Data Engineering            2016 – Present 

Member IEEE Technical Committee on Intelligent Informatics    2016 – Present 

Member IEEE Technical Committee on Semantic Computing     2016 – Present

Member International Society for Computational Biology         2013 – Present  

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